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Special Microscopy Techniques

* Exchange students do not have to consider this information when selecting suitable courses for an exchange stay.

Course Unit Code636-3027/02
Number of ECTS Credits Allocated5 ECTS credits
Type of Course Unit *Choice-compulsory type B
Level of Course Unit *Second Cycle
Year of Study *Second Year
Semester when the Course Unit is deliveredWinter Semester
Mode of DeliveryFace-to-face
Language of InstructionCzech
Prerequisites and Co-Requisites Course succeeds to compulsory courses of previous semester
Name of Lecturer(s)Personal IDName
VOD37prof. Ing. Vlastimil Vodárek, CSc.
Summary
The course is dealing with modern methods of structure characterization of materials which are exploited in materials and biomedical engineering. Students will learn about possibilities and limitations of individual experimental techniques, about methods of specimen preparation. Structure assessment of engineering and biological materials will be demonstrated on practical examples.
Learning Outcomes of the Course Unit
- explain principles of the most important microscopical techniques for characterization of engineering and biological materials,
- explain possibilities and limitations of individual techniques,
- learn, how to prepare specimens from engineering and biological materials,
- demonstrate applications of modern microscopical techniques on practical examples.
Course Contents
1. Basic goals of structure characterization of materials in biomedical and materials engineering.
2. Products of electron interaction with a specimen.
3. X-ray absorption in solids. Diffraction of electrons on crystal lattice in cristalline materials.
4. Microscopy techniques based on focused electron beam.
5. Transmission electron microscope (TEM) – principle, spatial resolution, amplitude and phase contrast, diffraction analysis in TEM.
6. Problems related to investigations on biological specimens in TEM. Low voltage TEM.
7. Analytical electron microscopy.
8. Preparation of specimens for TEM from engineering materials(extraction replicas, thin foils – electrolytic thinning, FIB).
9. Preparation of specimens for TEM from biological materials (chemical and physical methods).
10. Scanning electron microscope (SEM): principle, spatial resolution and depth of focus, images in secondary and backscatter electrons, diffraction analysis in SEM.
11. Scanning electron microscopes with deteriorated vacuum level in the specimen chamber – low vacuum SEM (LVSEM) and environmental SEM(ESEM), possibilities and limitations of their applications for non-conductive specimens.
12. Preparation of biological specimens for SEM (crygenic and chemical methods).
13. X-ray microanalysis in SEM – energy and wave length dispersive analyses, qualitative and quantitative analyses, limits of detection.
14. Typical applications of electron microscopy in materials and biomedical engineering.
Recommended or Required Reading
Required Reading:
WILLIAMS, D. B. and C. B. CARTER. Transmission electron microscopy, A textbook for materials science. 2nd edition, Springer US, 2012.
ISBN 978-0-387-76502-0.
DAWES, C. J. : Introduction to Biological Electron Microscopy: Theory and Techniques, Ladd Research Industries, Inc. Publisher Burlington, Vermont 1988.
VODÁREK, V. Strukturně fázová analýza, Ostrava: VŠB – TU Ostrava, 2013. Dostupné z:
http://katedry.fmmi.vsb.cz/Opory_FMMI/636/636-Strukturne_fazova_analyza.pdf.
KARLÍK, M. Úvod do transmisní elektronové mikroskopie, Praha: CVUT, 2011. ISBN 978-80-01-04729-3.
HULÍNSKÝ, V. a K. JUREK. Zkoumání látek elektronovým paprskem. Praha: SNTL, 1982.
DAWES, C. J. : Introduction to Biological Electron Microscopy: Theory and Techniques, Ladd Research Industries, Inc. Publisher Burlington, Vermont 1988.
Recommended Reading:
GOLDSTEIN, J., et al. Scanning electron microscopy and X – ray microanalysis. 3rd edition, New York: Springer US, 2003. ISBN 978-0-306-47292-3.
WILLIAMS, D. B. and C. B. CARTER. Transmission electron microscopy, A textbook for materials science. 2nd edition, Springer US, 2012.
ISBN 978-0-387-76502-0.
GOLDSTEIN, J., et al. Scanning electron microscopy and X – ray microanalysis. 3rd edition, New York: Springer US, 2003. ISBN
978-0-306-47292-3.
KALINA, T. a V. POKORNÝ: Základy elektronové mikroskopie pro biology. Praha: Univerzita Karlova, 1981.
Planned learning activities and teaching methods
Lectures, Tutorials, Experimental work in labs
Assesment methods and criteria
Task TitleTask TypeMaximum Number of Points
(Act. for Subtasks)
Minimum Number of Points for Task Passing
Credit and ExaminationCredit and Examination100 (100)51
        CreditCredit30 15
        ExaminationExamination70 36