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Basics of Microbiology

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Course Unit Code546-0044/02
Number of ECTS Credits Allocated5 ECTS credits
Type of Course Unit *Compulsory
Level of Course Unit *First Cycle
Year of Study *First Year
Semester when the Course Unit is deliveredSummer Semester
Mode of DeliveryFace-to-face
Language of InstructionCzech
Prerequisites and Co-Requisites Course succeeds to compulsory courses of previous semester
Name of Lecturer(s)Personal IDName
VOJ195doc. Mgr. Hana Vojtková, Ph.D.
Summary
The course clarifies the role of microorganisms in the live natural system and their roles in the different methods of processing waste from mining and other industries.
Students gain information on the morphology and physiology of acellular organisms and basic groups of microorganisms, their status in the nature as well as on the mutual relations of microbial populations, including an overview of basic pathogenic and non-pathogenic microorganism strains.
Some lectures will be dedicated to significant microorganism strains and their practical uses in modern biotechnologies related to waste management and their roles in forming and protecting the environment.
Learning Outcomes of the Course Unit
Target competences lie in gaining new knowledge and its application in problem solving, observation, experiments and communication:
- to characterize the attributes of prions, viruses and bacteria, to understand phylogenetic relations of the different groups, to learn about and to term characteristic organisms of the individual taxons and to understand the significance of pathogenic as well as non-pathogenic species
- to apply the gained knowledge in dealing with practical tasks in seminars, to consider the consequences of a phenomenon from the environmental, sanitary as well as economic points of view; to build a positive attitude to nature
- to be able to work independently on the set tasks, to observe and objectively record the experiment results, to adhere to safe (aseptic) work principles when working with biological material and technical equipment
- to be able to work with expert/academic texts, to be familiar with the expert terminology, to be able to synthetize the obtained experimental data and to justify own approach in dealing with a biological problem
Course Contents
1. Introduction to microbiology studies, important historical discoveries, perspectives of modern microbiology
2. Chemical structure of a microbial cell and general structure of a microbial cell, differences in the structure of prokaryotic and eukaryotic microorganisms
3. The physiology of microorganisms – the basics
4. The metabolism of microorganisms, the methods of energy use by microorganisms
5. Genetics of microorganisms, interactions of microorganisms and the environment
6. Acellular forms – viroids and prions, the pathogenicity of prions, EU preventive measures
7. Acellular organisms - viruses
8. Cellular microorganisms - archea
9. Cellular microorganisms - bacteria
10. Cellular microorganisms - microscopic filamentous fungi
11. Cellular microorganisms - cyanobacteria and algae
12. Microorganisms in mining technology for sustainable mine production
13. Microorganisms in waste management important from the sanitary point of view, applications of microorganisms in modern industrial biotechnologies, the role of microorganisms in the revitalization of environment after extraction and processing of mineral resources
Recommended or Required Reading
Required Reading:
VOTAVA, Miroslav. Lékařská mikrobiologie obecná. Brno: Neptun, 2005. 351 s. ISBN 80-86850-00-5
VOTAVA, Miroslav. Lékařská mikrobiologie speciální. Brno: Neptun, 2003. 495 s. ISBN 80-902896-6-5
BLACK, Jacquelyn G. Microbiology: Principles and Explorations. 7th edition. John Wiley and Sons, 2008. 846 p. ISBN: 978-0470107485
COWAN, Marjorie K. Microbiology: A Systems Approach. McGraw-Hill College, 2011. 880 s. ISBN 978-00735225242
NĚMEC, Miroslav a Dagmar MATOULKOVÁ. Základy obecné mikrobiologie. Brno: MuniPRESS, 2015. ISBN 978-80-210-7923-6
BEDNÁŘ, Marek, Věra FRAŇKOVÁ, Andrej SOUČEK, Jiří SCHINDLER a Jiří VÁVRA. Lékařská mikrobiologie: bakteriologie, virologie, parazitologie. Praha: Triton, 2009. 560 s. ISBN 978-80-9028-966-5
SEDLÁČEK, Ivo. Taxonomie prokaryot. Brno: Masarykova univerzita, 2007. 270 s. ISBN 80-210-4207-9
PEPPER, Ian, Charles GERBA a Terry GENTRY. Environmental Microbiology. Academic Press, 2015. ISBN 978-0-123-94626-3
VOJTKOVÁ, Hana. Sbírka mikroorganismů: Atlas mikroorganismů. Ostrava: VŠB-TUO, ©2021. Dostupné z: https://www.hgf.vsb.cz/546/cs/veda-a-vyzkum/sbirka-mikroorganismu/
Recommended Reading:
GLAZER, Alexander N. a Hiroshi NIKAIDO. Microbial biotechnology : fundamentals of applied mikrobiology. 2nd ed. New York: Cambridge University Press, 2007. xvii, 554 s. ISBN 978-0-521-84210-5
MIMS, Cedric A. (ed.) Medical microbiology. 3rd ed. Edinburgh: Elsevier, 2004. ix, 660 s. ISBN 0-323-03575-2
MOAT, Albert G., John W. FOSTER a Michael P. SPECTOR. Microbial Physiology. New York: Wiley-Liss, 2002. 714 s. ISBN 978-0-471-39483-9
DEMNEROVÁ, Kateřina a kol. Laboratorní cvičení z mikrobiologie. Praha: Vydavatelství VŠCHT, 2009. ISBN 978-80-7080-415-5
SLÁDEČEK, Vladimír a Alena SLÁDEČKOVÁ. Atlas vodních organismů se zřetelem na vodárenství, povrchové vody a čistírny odpadních vod. Destruenti a producenti, 1. díl. Praha: Česká vědeckotechnická vodohospodářská společnost, 1996. 350 s. ISBN 80-02-01080-9 (sv. 1), ISBN 80-02-01081-7 (soubor)
ŠIMONOVIČOVÁ, Alexandra, Peter FERIANC, Eleonóra FRANKOVÁ, Katarína PAVLIČKOVÁ a Elena PIECKOVÁ. Mikrobiológia pre environmentalistov. Bratislava: Vydavateľstvo Univerzity Komenského, 2008. 156 s. ISBN 978-80-223-2314-7
MIMS, Cedric A. (ed.) Medical microbiology. Elsevier, 2004. ix, 660 s. ISBN 0-323-03575-2
MOAT, Albert G., John W. FOSTER a Michael P. SPECTOR. Microbial Physiology. New York: Wiley-Liss, 2002. 714 s. ISBN 978-0-471-39483-9
Planned learning activities and teaching methods
Lectures, Individual consultations, Experimental work in labs, Other activities
Assesment methods and criteria
Task TitleTask TypeMaximum Number of Points
(Act. for Subtasks)
Minimum Number of Points for Task Passing
Credit and ExaminationCredit and Examination100 (100)51
        CreditCredit33 33
        ExaminationExamination67 (67)18
                Písemná zkouškaWritten examination37 0
                Ústní zkouškaOral examination30 0