• Sung, W. K. (2009). Algorithms in bioinformatics: A practical introduction. CRC Press.
• Compeau, Phillip, and Pavel Pevzner. Bioinformatics algorithms: an active learning approach. Vol. 1. La Jolla: Active Learning Publishers, 2015.
• Zvelebil, Marketa J., and Jeremy O. Baum. Understanding bioinformatics. Garland Science, 2007.
Algorithms for Bioinformatics
| Language of instruction | angličtina, čeština |
|---|---|
| Code | 460-6025 |
| Abbreviation | ABI |
| Course title | Algorithms for Bioinformatics |
| Coordinating department | Department of Computer Science |
| Course coordinator | prof. RNDr. Václav Snášel, CSc. |
Summary
The course is focused on biological applications, computational problems, and their various advanced algorithmic solutions. Students will be introduced, in-depth, to the algorithmic techniques applied in bioinformatics. Each topic provides the biological motivation and precisely defines the corresponding computational problems; different methods and the corresponding algorithms are also presented including detailed examples to illustrate each algorithm.
Literature
Advised literature
• M. Dorigo, T. Stützle, Ant Colony Optimization, MIT Press, Cambridge, MA, 2004.
• A. Engelbrecht, Computational Intelligence: An Introduction, 2nd Edition, Wiley, New York, NY, USA, 2007.
• A. Engelbrecht, Computational Intelligence: An Introduction, 2nd Edition, Wiley, New York, NY, USA, 2007.